Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.26□□□□□ -0.29
Col1a1P11087 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Col1a1P11087 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.26□□□□□ -0.29
Col1a1P11087 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col1a1P11087 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.26□□□□□ -0.29
Col1a1P11087 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col1a1P11087 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col1a1P11087 Gm23604-201ENSMUST00000104311 132 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 Gm22495-201ENSMUST00000104492 126 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.25□□□□□ -0.29
Col1a1P11087 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 Gm8152-201ENSMUST00000120842 637 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC13.25□□□□□ -0.29
Col1a1P11087 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 Gm44640-201ENSMUST00000206894 247 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 AC121567.1-201ENSMUST00000227213 842 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.25□□□□□ -0.29
Col1a1P11087 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.25□□□□□ -0.29
Col1a1P11087 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col1a1P11087 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col1a1P11087 AC159810.1-201ENSMUST00000214838 1480 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col1a1P11087 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col1a1P11087 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.25□□□□□ -0.29
Col1a1P11087 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col1a1P11087 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Mir744-201ENSMUST00000103261 100 ntBASIC13.24□□□□□ -0.29
Col1a1P11087 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Col1a1P11087 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Col1a1P11087 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col1a1P11087 Gm11380-201ENSMUST00000118067 560 ntBASIC13.24□□□□□ -0.29
Col1a1P11087 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC13.24□□□□□ -0.29
Col1a1P11087 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC13.24□□□□□ -0.29
Col1a1P11087 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC13.24□□□□□ -0.29
Col1a1P11087 Mir8091-201ENSMUST00000183602 139 ntBASIC13.24□□□□□ -0.29
Col1a1P11087 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Col1a1P11087 Gm2345-201ENSMUST00000193451 589 ntBASIC13.24□□□□□ -0.29
Col1a1P11087 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.24□□□□□ -0.29
Col1a1P11087 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Gm45481-201ENSMUST00000209717 877 ntBASIC13.24□□□□□ -0.29
Col1a1P11087 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col1a1P11087 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC13.24□□□□□ -0.29
Col1a1P11087 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col1a1P11087 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col1a1P11087 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col1a1P11087 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col1a1P11087 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col1a1P11087 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col1a1P11087 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col1a1P11087 Gm14034-201ENSMUST00000120147 551 ntBASIC13.23□□□□□ -0.29
Col1a1P11087 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms