Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.66□□□□□ -0.38
Hoxc6P10629 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc6P10629 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc6P10629 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc6P10629 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc6P10629 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.66□□□□□ -0.38
Hoxc6P10629 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc6P10629 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Hoxc6P10629 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc6P10629 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxc6P10629 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Hoxc6P10629 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxc6P10629 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Hoxc6P10629 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Gm17221-201ENSMUST00000163909 481 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 Gm5529-201ENSMUST00000165691 891 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 Gm17073-201ENSMUST00000168069 556 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 Olfml3-204ENSMUST00000169286 874 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxc6P10629 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Gm9162-201ENSMUST00000182081 991 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 Gm42660-201ENSMUST00000197733 947 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.65□□□□□ -0.38
Hoxc6P10629 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hoxc6P10629 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.65□□□□□ -0.38
Hoxc6P10629 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hoxc6P10629 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc6P10629 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Hoxc6P10629 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxc6P10629 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hoxc6P10629 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Hoxc6P10629 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxc6P10629 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxc6P10629 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxc6P10629 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxc6P10629 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.64□□□□□ -0.39
Hoxc6P10629 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.64□□□□□ -0.39
Hoxc6P10629 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.64□□□□□ -0.39
Hoxc6P10629 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc6P10629 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Gm43969-201ENSMUST00000204833 535 ntBASIC12.64□□□□□ -0.39
Hoxc6P10629 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.64□□□□□ -0.39
Hoxc6P10629 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Gm5178-201ENSMUST00000219380 898 ntBASIC12.64□□□□□ -0.39
Hoxc6P10629 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Gm25580-201ENSMUST00000083409 327 ntBASIC12.64□□□□□ -0.39
Hoxc6P10629 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.64□□□□□ -0.39
Hoxc6P10629 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.64□□□□□ -0.39
Hoxc6P10629 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc6P10629 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc6P10629 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms