Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm10051-201ENSMUST00000145209 414 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.18□□□□□ -0.94
Hoxd3P09027 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Hoxd3P09027 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm9211-201ENSMUST00000182882 975 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm27530-201ENSMUST00000184096 98 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm38233-201ENSMUST00000194259 807 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm45575-201ENSMUST00000210283 548 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Hoxd3P09027 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 AC131100.2-201ENSMUST00000227701 998 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Phf7-206ENSMUST00000228437 1373 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Hoxd3P09027 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.18□□□□□ -0.94
Hoxd3P09027 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxd3P09027 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Hoxd3P09027 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.17□□□□□ -0.94
Hoxd3P09027 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.17□□□□□ -0.94
Hoxd3P09027 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Gm43747-201ENSMUST00000201412 1330 ntBASIC9.17□□□□□ -0.94
Hoxd3P09027 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Gm13809-201ENSMUST00000117921 597 ntBASIC9.17□□□□□ -0.94
Hoxd3P09027 Gm15207-201ENSMUST00000119259 442 ntBASIC9.17□□□□□ -0.94
Hoxd3P09027 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Gm12176-201ENSMUST00000121420 875 ntBASIC9.17□□□□□ -0.94
Hoxd3P09027 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Mir1943-201ENSMUST00000158276 73 ntBASIC9.17□□□□□ -0.94
Hoxd3P09027 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Gm8815-201ENSMUST00000173809 620 ntBASIC9.17□□□□□ -0.94
Hoxd3P09027 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.17□□□□□ -0.94
Hoxd3P09027 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC9.17□□□□□ -0.94
Hoxd3P09027 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC9.17□□□□□ -0.94
Hoxd3P09027 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.17□□□□□ -0.94
Hoxd3P09027 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.17□□□□□ -0.94
Hoxd3P09027 AC105408.1-201ENSMUST00000227771 802 ntBASIC9.17□□□□□ -0.94
Hoxd3P09027 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxd3P09027 Ginm1-202ENSMUST00000065124 300 ntBASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms