Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Hoxa3P02831 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Hoxa3P02831 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Gm11246-201ENSMUST00000120880 345 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Gm8737-201ENSMUST00000122208 642 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.62□□□□□ -0.87
Hoxa3P02831 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 Gm21092-201ENSMUST00000178995 955 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.62□□□□□ -0.87
Hoxa3P02831 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 Gm44506-201ENSMUST00000206278 965 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.62□□□□□ -0.87
Hoxa3P02831 Gm2517-201ENSMUST00000215651 348 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Hoxa3P02831 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Hoxa3P02831 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Hoxa3P02831 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Hoxa3P02831 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.62□□□□□ -0.87
Hoxa3P02831 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hoxa3P02831 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.61□□□□□ -0.87
Hoxa3P02831 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.61□□□□□ -0.87
Hoxa3P02831 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Hoxa3P02831 Gm12419-201ENSMUST00000116649 636 ntBASIC9.61□□□□□ -0.87
Hoxa3P02831 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.61□□□□□ -0.87
Hoxa3P02831 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.61□□□□□ -0.87
Hoxa3P02831 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.61□□□□□ -0.87
Hoxa3P02831 Gm27910-201ENSMUST00000185004 107 ntBASIC9.61□□□□□ -0.87
Hoxa3P02831 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.61□□□□□ -0.87
Hoxa3P02831 Gm37458-201ENSMUST00000194055 410 ntBASIC9.61□□□□□ -0.87
Hoxa3P02831 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.61□□□□□ -0.87
Hoxa3P02831 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Hoxa3P02831 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Hoxa3P02831 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxa3P02831 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.61□□□□□ -0.87
Hoxa3P02831 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.6□□□□□ -0.87
Hoxa3P02831 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Gm7150-201ENSMUST00000122032 981 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms