Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
IghmP01872 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
IghmP01872 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
IghmP01872 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
IghmP01872 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
IghmP01872 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
IghmP01872 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
IghmP01872 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
IghmP01872 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.68□□□□□ -0.7
IghmP01872 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.68□□□□□ -0.7
IghmP01872 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
IghmP01872 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
IghmP01872 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.68□□□□□ -0.7
IghmP01872 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
IghmP01872 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.67□□□□□ -0.7
IghmP01872 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
IghmP01872 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
IghmP01872 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.67□□□□□ -0.7
IghmP01872 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.67□□□□□ -0.7
IghmP01872 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.67□□□□□ -0.7
IghmP01872 Gm12407-201ENSMUST00000180219 324 ntBASIC10.67□□□□□ -0.7
IghmP01872 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 Gm29499-201ENSMUST00000189151 486 ntBASIC10.67□□□□□ -0.7
IghmP01872 Gm5733-201ENSMUST00000190232 939 ntBASIC10.67□□□□□ -0.7
IghmP01872 Gm28329-201ENSMUST00000191208 689 ntBASIC10.67□□□□□ -0.7
IghmP01872 Gm29171-201ENSMUST00000191397 486 ntBASIC10.67□□□□□ -0.7
IghmP01872 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.67□□□□□ -0.7
IghmP01872 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.67□□□□□ -0.7
IghmP01872 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
IghmP01872 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
IghmP01872 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.67□□□□□ -0.7
IghmP01872 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
IghmP01872 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
IghmP01872 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
IghmP01872 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
IghmP01872 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
IghmP01872 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
IghmP01872 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.66□□□□□ -0.7
IghmP01872 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.66□□□□□ -0.7
IghmP01872 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
IghmP01872 Gm15595-201ENSMUST00000120840 961 ntBASIC10.66□□□□□ -0.7
IghmP01872 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.66□□□□□ -0.7
IghmP01872 Gm17040-202ENSMUST00000170597 889 ntBASIC10.66□□□□□ -0.7
IghmP01872 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.66□□□□□ -0.7
IghmP01872 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.66□□□□□ -0.7
IghmP01872 Gm7504-201ENSMUST00000201449 424 ntBASIC10.66□□□□□ -0.7
IghmP01872 Gm17825-201ENSMUST00000206836 794 ntBASIC10.66□□□□□ -0.7
IghmP01872 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.66□□□□□ -0.7
IghmP01872 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
IghmP01872 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.66□□□□□ -0.7
IghmP01872 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.66□□□□□ -0.7
IghmP01872 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
IghmP01872 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms