Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CopeO89079 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.74□□□□□ -0.53
CopeO89079 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.74□□□□□ -0.53
CopeO89079 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CopeO89079 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
CopeO89079 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Gm12957-201ENSMUST00000117835 377 ntBASIC11.74□□□□□ -0.53
CopeO89079 Gm15207-201ENSMUST00000119259 442 ntBASIC11.74□□□□□ -0.53
CopeO89079 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.74□□□□□ -0.53
CopeO89079 Gm17420-201ENSMUST00000164753 153 ntBASIC11.74□□□□□ -0.53
CopeO89079 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.74□□□□□ -0.53
CopeO89079 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.74□□□□□ -0.53
CopeO89079 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.74□□□□□ -0.53
CopeO89079 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.74□□□□□ -0.53
CopeO89079 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.74□□□□□ -0.53
CopeO89079 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.74□□□□□ -0.53
CopeO89079 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.74□□□□□ -0.53
CopeO89079 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.74□□□□□ -0.53
CopeO89079 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.74□□□□□ -0.53
CopeO89079 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.74□□□□□ -0.53
CopeO89079 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.74□□□□□ -0.53
CopeO89079 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CopeO89079 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
CopeO89079 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.74□□□□□ -0.53
CopeO89079 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.74□□□□□ -0.53
CopeO89079 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.74□□□□□ -0.53
CopeO89079 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.74□□□□□ -0.53
CopeO89079 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CopeO89079 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CopeO89079 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.73□□□□□ -0.53
CopeO89079 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.73□□□□□ -0.53
CopeO89079 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CopeO89079 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
CopeO89079 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CopeO89079 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CopeO89079 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.73□□□□□ -0.53
CopeO89079 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CopeO89079 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.73□□□□□ -0.53
CopeO89079 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.73□□□□□ -0.53
CopeO89079 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
CopeO89079 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.73□□□□□ -0.53
CopeO89079 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.73□□□□□ -0.53
CopeO89079 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.73□□□□□ -0.53
CopeO89079 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.73□□□□□ -0.53
CopeO89079 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.73□□□□□ -0.53
CopeO89079 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CopeO89079 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.73□□□□□ -0.53
CopeO89079 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CopeO89079 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CopeO89079 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CopeO89079 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.73□□□□□ -0.53
CopeO89079 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
CopeO89079 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms