Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.5□□□□□ -0.57
Chrna4O70174 Gm15352-201ENSMUST00000118696 270 ntBASIC11.5□□□□□ -0.57
Chrna4O70174 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.5□□□□□ -0.57
Chrna4O70174 Gm11244-201ENSMUST00000121243 237 ntBASIC11.5□□□□□ -0.57
Chrna4O70174 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.5□□□□□ -0.57
Chrna4O70174 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.5□□□□□ -0.57
Chrna4O70174 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Chrna4O70174 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Gm7741-201ENSMUST00000181445 989 ntBASIC11.5□□□□□ -0.57
Chrna4O70174 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.5□□□□□ -0.57
Chrna4O70174 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.5□□□□□ -0.57
Chrna4O70174 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.5□□□□□ -0.57
Chrna4O70174 Gm9353-201ENSMUST00000200472 604 ntBASIC11.5□□□□□ -0.57
Chrna4O70174 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.5□□□□□ -0.57
Chrna4O70174 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.5□□□□□ -0.57
Chrna4O70174 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Gm45856-201ENSMUST00000212752 416 ntBASIC11.5□□□□□ -0.57
Chrna4O70174 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Chrna4O70174 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Chrna4O70174 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Chrna4O70174 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.5□□□□□ -0.57
Chrna4O70174 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Chrna4O70174 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Chrna4O70174 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chrna4O70174 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Chrna4O70174 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.49□□□□□ -0.57
Chrna4O70174 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.49□□□□□ -0.57
Chrna4O70174 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.49□□□□□ -0.57
Chrna4O70174 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Chrna4O70174 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Gm12419-201ENSMUST00000116649 636 ntBASIC11.49□□□□□ -0.57
Chrna4O70174 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.49□□□□□ -0.57
Chrna4O70174 Gm15617-201ENSMUST00000118973 771 ntBASIC11.49□□□□□ -0.57
Chrna4O70174 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.49□□□□□ -0.57
Chrna4O70174 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Gm20426-201ENSMUST00000173657 440 ntBASIC11.49□□□□□ -0.57
Chrna4O70174 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.49□□□□□ -0.57
Chrna4O70174 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.49□□□□□ -0.57
Chrna4O70174 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.49□□□□□ -0.57
Chrna4O70174 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.49□□□□□ -0.57
Chrna4O70174 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.49□□□□□ -0.57
Chrna4O70174 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Chrna4O70174 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.49□□□□□ -0.57
Chrna4O70174 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Chrna4O70174 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Chrna4O70174 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Chrna4O70174 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.49□□□□□ -0.57
Chrna4O70174 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chrna4O70174 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.49□□□□□ -0.57
Chrna4O70174 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chrna4O70174 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Chrna4O70174 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Chrna4O70174 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Chrna4O70174 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.48□□□□□ -0.57
Chrna4O70174 Gm15573-201ENSMUST00000119487 540 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms