Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Mir671-201ENSMUST00000102432 98 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm23612-201ENSMUST00000103823 110 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm13981-201ENSMUST00000122360 447 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm9372-201ENSMUST00000168454 430 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm24328-201ENSMUST00000175104 67 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm23576-201ENSMUST00000179918 110 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm43249-201ENSMUST00000200464 458 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm29763-201ENSMUST00000205306 616 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.57□□□□□ -0.4
Trdmt1O55055 BC106175-202ENSMUST00000219344 1213 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.57□□□□□ -0.4
Trdmt1O55055 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.57□□□□□ -0.4
Trdmt1O55055 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.57□□□□□ -0.4
Trdmt1O55055 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdmt1O55055 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.56□□□□□ -0.4
Trdmt1O55055 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm23400-201ENSMUST00000174994 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm26463-201ENSMUST00000175065 101 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm24332-201ENSMUST00000175102 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm25959-201ENSMUST00000175112 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm22475-201ENSMUST00000175169 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm22903-201ENSMUST00000175193 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm25070-201ENSMUST00000175237 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm24159-201ENSMUST00000175264 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm25299-201ENSMUST00000175283 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm23798-201ENSMUST00000175560 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm23802-201ENSMUST00000175565 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm25708-201ENSMUST00000177687 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm24370-201ENSMUST00000178007 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm23049-201ENSMUST00000178068 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm28019-201ENSMUST00000178138 101 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm25571-201ENSMUST00000178322 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm25355-201ENSMUST00000178456 101 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm24975-201ENSMUST00000178492 101 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm23189-201ENSMUST00000178954 102 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm25100-201ENSMUST00000179750 101 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm23064-201ENSMUST00000179866 101 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm4903-201ENSMUST00000210462 405 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Gm10020-201ENSMUST00000081993 612 ntBASIC12.56□□□□□ -0.4
Trdmt1O55055 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Trdmt1O55055 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.56□□□□□ -0.4
Trdmt1O55055 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdmt1O55055 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms