Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Hps1O08983 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Gm23200-201ENSMUST00000104379 132 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hps1O08983 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Gm12266-201ENSMUST00000120311 962 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Gm14999-201ENSMUST00000121039 624 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.67□□□□□ -0.7
Hps1O08983 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.67□□□□□ -0.7
Hps1O08983 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.67□□□□□ -0.7
Hps1O08983 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hps1O08983 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hps1O08983 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hps1O08983 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.67□□□□□ -0.7
Hps1O08983 Gm37201-201ENSMUST00000191845 523 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Gm44545-201ENSMUST00000208262 746 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.67□□□□□ -0.7
Hps1O08983 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.67□□□□□ -0.7
Hps1O08983 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Spcs1-203ENSMUST00000226374 592 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.67□□□□□ -0.7
Hps1O08983 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hps1O08983 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hps1O08983 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hps1O08983 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Hps1O08983 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hps1O08983 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hps1O08983 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.66□□□□□ -0.7
Hps1O08983 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.66□□□□□ -0.7
Hps1O08983 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hps1O08983 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.66□□□□□ -0.7
Hps1O08983 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hps1O08983 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hps1O08983 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hps1O08983 Gm9062-201ENSMUST00000117712 727 ntBASIC10.66□□□□□ -0.7
Hps1O08983 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.66□□□□□ -0.7
Hps1O08983 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.66□□□□□ -0.7
Hps1O08983 Gm15131-201ENSMUST00000119124 595 ntBASIC10.66□□□□□ -0.7
Hps1O08983 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.66□□□□□ -0.7
Hps1O08983 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.66□□□□□ -0.7
Hps1O08983 Gm5070-201ENSMUST00000177599 862 ntBASIC10.66□□□□□ -0.7
Hps1O08983 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.66□□□□□ -0.7
Hps1O08983 Gm8885-201ENSMUST00000189382 598 ntBASIC10.66□□□□□ -0.7
Hps1O08983 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.66□□□□□ -0.7
Hps1O08983 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.66□□□□□ -0.7
Hps1O08983 Gm45433-201ENSMUST00000209386 247 ntBASIC10.66□□□□□ -0.7
Hps1O08983 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hps1O08983 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms