Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Fam220-ps-201ENSMUST00000116535 783 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm15720-201ENSMUST00000117133 282 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm12072-201ENSMUST00000118293 715 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm13688-201ENSMUST00000121557 608 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm14441-201ENSMUST00000121960 540 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm25694-201ENSMUST00000175448 282 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm9578-201ENSMUST00000182354 753 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm19927-201ENSMUST00000185792 781 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm3379-201ENSMUST00000222259 642 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 CU025215.1-201ENSMUST00000222986 603 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 AC127583.1-201ENSMUST00000224351 540 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 AC163646.3-202ENSMUST00000228685 691 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Paupar-201ENSMUST00000194826 3482 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc188F6WEU2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm14071-201ENSMUST00000117817 509 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm15570-201ENSMUST00000122093 625 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm12254-201ENSMUST00000134617 471 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm6114-201ENSMUST00000182472 968 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm18014-201ENSMUST00000183369 817 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm45745-201ENSMUST00000211447 1180 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm8960-201ENSMUST00000219787 788 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.5□□□□□ -0.57
Ccdc188F6WEU2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms