Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Gm15566-201ENSMUST00000121130 590 ntBASIC11.74□□□□□ -0.53
Atf6F6VAN0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Gm29499-201ENSMUST00000189151 486 ntBASIC11.74□□□□□ -0.53
Atf6F6VAN0 Gm28329-201ENSMUST00000191208 689 ntBASIC11.74□□□□□ -0.53
Atf6F6VAN0 Gm29171-201ENSMUST00000191397 486 ntBASIC11.74□□□□□ -0.53
Atf6F6VAN0 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.74□□□□□ -0.53
Atf6F6VAN0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.74□□□□□ -0.53
Atf6F6VAN0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.74□□□□□ -0.53
Atf6F6VAN0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf6F6VAN0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm15595-201ENSMUST00000120840 961 ntBASIC11.73□□□□□ -0.53
Atf6F6VAN0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm3150-201ENSMUST00000166418 204 ntBASIC11.73□□□□□ -0.53
Atf6F6VAN0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm29199-201ENSMUST00000187766 775 ntBASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm37246-201ENSMUST00000192665 835 ntBASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm6722-201ENSMUST00000221586 390 ntBASIC11.73□□□□□ -0.53
Atf6F6VAN0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.73□□□□□ -0.53
Atf6F6VAN0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf6F6VAN0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Atf6F6VAN0 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.72□□□□□ -0.53
Atf6F6VAN0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms