Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Gm12887B1AVM1 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Gm12887B1AVM1 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Gm12887B1AVM1 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Gm12887B1AVM1 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Gm12887B1AVM1 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Gm12887B1AVM1 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.19□□□□□ -0.94
Gm12887B1AVM1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Gm5035-201ENSMUST00000215581 927 ntBASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm12887B1AVM1 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm14071-201ENSMUST00000117817 509 ntBASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm6023-201ENSMUST00000118217 606 ntBASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm28937-201ENSMUST00000185413 695 ntBASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm29400-201ENSMUST00000187208 695 ntBASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm28662-201ENSMUST00000188446 695 ntBASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm28251-201ENSMUST00000188835 695 ntBASIC9.18□□□□□ -0.94
Gm12887B1AVM1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm37318-201ENSMUST00000194325 695 ntBASIC9.18□□□□□ -0.94
Gm12887B1AVM1 Gm38017-201ENSMUST00000194768 695 ntBASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms