Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm14993-201ENSMUST00000121180 164 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm20781-201ENSMUST00000193154 693 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm21736-201ENSMUST00000195399 693 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn3aA2ASI5 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Gm12463-201ENSMUST00000118271 849 ntBASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Gm11578-201ENSMUST00000118530 459 ntBASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Gm11952-201ENSMUST00000121172 821 ntBASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Gm37365-201ENSMUST00000193109 409 ntBASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn3aA2ASI5 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Platr10-202ENSMUST00000191479 818 ntBASIC12.6□□□□□ -0.39
Scn3aA2ASI5 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Gm31274-201ENSMUST00000197356 229 ntBASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Gm43506-201ENSMUST00000200675 753 ntBASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Gm7880-201ENSMUST00000203748 871 ntBASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms