Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Gm23368-201ENSMUST00000116939 96 ntBASIC5.84□□□□□ -1.48
Ubr4A2AN08 Gm16058-201ENSMUST00000124392 427 ntTSL 2 BASIC5.84□□□□□ -1.48
Ubr4A2AN08 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC5.84□□□□□ -1.48
Ubr4A2AN08 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Gm5043-201ENSMUST00000202103 820 ntBASIC5.84□□□□□ -1.48
Ubr4A2AN08 4933432K03Rik-202ENSMUST00000206244 765 ntTSL 3 BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Gm44907-201ENSMUST00000207423 1633 ntBASIC5.84□□□□□ -1.48
Ubr4A2AN08 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC5.84□□□□□ -1.48
Ubr4A2AN08 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
Ubr4A2AN08 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm25842-201ENSMUST00000122590 322 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm7047-201ENSMUST00000196224 1063 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm8623-201ENSMUST00000071573 436 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 CT010453.1-201ENSMUST00000226795 2201 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm16330-201ENSMUST00000128324 297 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm43243-201ENSMUST00000199964 278 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Rpl6-201ENSMUST00000031617 1270 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm10741-201ENSMUST00000218151 1748 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms