Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Gm14193-201ENSMUST00000105067 153 ntBASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Gm12463-201ENSMUST00000118271 849 ntBASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Gm8342-201ENSMUST00000209839 757 ntBASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Gm19208-201ENSMUST00000213861 912 ntBASIC11.42□□□□□ -0.58
H2afb2S4R1M3 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm24844-201ENSMUST00000158679 127 ntBASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm6439-201ENSMUST00000199849 862 ntBASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm44506-201ENSMUST00000206278 965 ntBASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm1821-202ENSMUST00000227415 750 ntBASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
H2afb2S4R1M3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm23251-201ENSMUST00000103773 110 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm7504-201ENSMUST00000201449 424 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms