Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm24891-201ENSMUST00000104391 136 ntBASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm11783-201ENSMUST00000119549 885 ntBASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm26047-201ENSMUST00000157308 113 ntBASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Mir8093-201ENSMUST00000185043 137 ntBASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm26047-202ENSMUST00000198840 115 ntBASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm13035-201ENSMUST00000117496 342 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm11450-201ENSMUST00000121144 333 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm18734-201ENSMUST00000172937 808 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm5733-201ENSMUST00000190232 939 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm45113-201ENSMUST00000207518 165 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm19208-201ENSMUST00000213861 912 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ClcnkaQ9WUB7 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ClcnkaQ9WUB7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ClcnkaQ9WUB7 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
ClcnkaQ9WUB7 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms