Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm17040-202ENSMUST00000170597 889 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm26461-201ENSMUST00000175064 290 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm28937-201ENSMUST00000185413 695 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm29400-201ENSMUST00000187208 695 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm28662-201ENSMUST00000188446 695 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm28251-201ENSMUST00000188835 695 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm37318-201ENSMUST00000194325 695 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm38017-201ENSMUST00000194768 695 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm37287-201ENSMUST00000195449 695 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm37793-201ENSMUST00000195548 695 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm6450-201ENSMUST00000200896 574 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Mir5120-201ENSMUST00000175020 78 ntBASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Mir5132-201ENSMUST00000175166 71 ntBASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Gm38117-201ENSMUST00000194653 939 ntBASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Gm270-201ENSMUST00000223010 976 ntBASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a2Q9JLR1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms