Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm37017-201ENSMUST00000195266 747 ntBASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Rprl1-202ENSMUST00000198476 238 ntBASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Gm17931-201ENSMUST00000208132 634 ntBASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Prl7a1-203ENSMUST00000224852 1283 ntBASIC10.82□□□□□ -0.68
Trim39Q9ESN2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim39Q9ESN2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm25509-201ENSMUST00000116985 106 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm12036-201ENSMUST00000120008 530 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm12164-201ENSMUST00000121695 551 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm17376-201ENSMUST00000166016 84 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm3344-201ENSMUST00000169610 603 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm22993-201ENSMUST00000175423 254 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 AA914427-201ENSMUST00000193194 1166 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm43438-201ENSMUST00000198133 379 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm45276-201ENSMUST00000209549 1086 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim39Q9ESN2 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim39Q9ESN2 Gm18829-201ENSMUST00000188150 1622 ntBASIC10.8□□□□□ -0.68
Trim39Q9ESN2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms