Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tubb3Q9ERD7 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Gm12857-201ENSMUST00000117678 592 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Gm13045-201ENSMUST00000119019 712 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Gm10051-201ENSMUST00000145209 414 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Gm9550-201ENSMUST00000161130 862 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Gm8100-201ENSMUST00000182906 988 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Gm37246-201ENSMUST00000192665 835 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Gm2965-201ENSMUST00000198365 343 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tubb3Q9ERD7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Gm14724-201ENSMUST00000118400 537 ntBASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Gm5705-201ENSMUST00000066241 711 ntBASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tubb3Q9ERD7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms