Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm11814-201ENSMUST00000119515 929 ntBASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm6114-201ENSMUST00000182472 968 ntBASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm9192-201ENSMUST00000183221 985 ntBASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Mir6977-201ENSMUST00000184960 64 ntBASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3a3Q9D554 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Gm26927-201ENSMUST00000182385 965 ntBASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Gm27437-201ENSMUST00000183429 107 ntBASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Gm27486-201ENSMUST00000184923 80 ntBASIC11.49□□□□□ -0.57
Sf3a3Q9D554 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms