Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Snf8Q9CZ28 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Snf8Q9CZ28 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Gm26047-201ENSMUST00000157308 113 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Gm44364-201ENSMUST00000198368 141 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Gm26047-202ENSMUST00000198840 115 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Gm45331-201ENSMUST00000209868 554 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Snf8Q9CZ28 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.77□□□□□ -0.53
Snf8Q9CZ28 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm43179-201ENSMUST00000198797 275 ntBASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm43822-201ENSMUST00000200285 476 ntBASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm3961-201ENSMUST00000204425 994 ntBASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm17827-201ENSMUST00000211825 742 ntBASIC11.76□□□□□ -0.53
Snf8Q9CZ28 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.76□□□□□ -0.53
Snf8Q9CZ28 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Snf8Q9CZ28 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Gm14723-201ENSMUST00000118686 215 ntBASIC11.75□□□□□ -0.53
Snf8Q9CZ28 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.75□□□□□ -0.53
Snf8Q9CZ28 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Gm38341-201ENSMUST00000195357 515 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms