Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm12579-201ENSMUST00000118040 783 ntBASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm13461-201ENSMUST00000120980 662 ntBASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm8199-201ENSMUST00000121323 823 ntBASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm2260-201ENSMUST00000184965 657 ntBASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm37319-201ENSMUST00000193500 636 ntBASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm6439-201ENSMUST00000199849 862 ntBASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.03□□□□□ -0.32
Trim11Q99PQ2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim11Q99PQ2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Dopey2-207ENSMUST00000227156 7340 ntBASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim11Q99PQ2 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.02□□□□□ -0.33
Trim11Q99PQ2 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.01□□□□□ -0.33
Trim11Q99PQ2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Gm15515-201ENSMUST00000117827 822 ntBASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Gm29499-201ENSMUST00000189151 486 ntBASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Gm28329-201ENSMUST00000191208 689 ntBASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Gm29171-201ENSMUST00000191397 486 ntBASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms