Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm6686-201ENSMUST00000178455 258 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm42974-201ENSMUST00000199556 2654 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm8163-201ENSMUST00000122020 1060 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm16288-201ENSMUST00000137940 367 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm12377-201ENSMUST00000118656 252 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm13377-201ENSMUST00000137984 683 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Gm16560-201ENSMUST00000159115 404 ntBASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh23Q99PF4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Gm24161-201ENSMUST00000104592 130 ntBASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Gm14227-201ENSMUST00000119431 629 ntBASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Gm9574-201ENSMUST00000173127 845 ntBASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Gm7790-201ENSMUST00000118716 1310 ntBASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Gm37036-201ENSMUST00000192836 2506 ntBASIC11.27□□□□□ -0.6
Cdh23Q99PF4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.27□□□□□ -0.6
Cdh23Q99PF4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Gm14571-201ENSMUST00000118292 570 ntBASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 AC139155.1-201ENSMUST00000226043 444 ntBASIC11.27□□□□□ -0.61
Cdh23Q99PF4 AC163646.3-202ENSMUST00000228685 691 ntBASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms