Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Gm15711-201ENSMUST00000118889 535 ntBASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Gm7003-201ENSMUST00000195089 312 ntBASIC11.11□□□□□ -0.63
Rnf111Q99ML9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Gm12380-201ENSMUST00000119012 544 ntBASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Gm14208-201ENSMUST00000119645 678 ntBASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Gm2383-201ENSMUST00000181461 807 ntBASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Mir7677-201ENSMUST00000184226 67 ntBASIC11.1□□□□□ -0.63
Rnf111Q99ML9 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Gm45186-201ENSMUST00000206874 478 ntBASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.1□□□□□ -0.63
Rnf111Q99ML9 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.1□□□□□ -0.63
Rnf111Q99ML9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms