Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.77□□□□□ -0.69
Nkd1Q99MH6 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkd1Q99MH6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm13665-201ENSMUST00000120830 528 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm26361-201ENSMUST00000158868 186 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm8343-201ENSMUST00000182705 994 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Mir8093-201ENSMUST00000185043 137 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm3961-201ENSMUST00000204425 994 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm44967-201ENSMUST00000207047 631 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm7940-201ENSMUST00000218195 769 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkd1Q99MH6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Gm24255-201ENSMUST00000104481 128 ntBASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Gm4310-201ENSMUST00000177847 889 ntBASIC10.75□□□□□ -0.69
Nkd1Q99MH6 Gm5982-201ENSMUST00000196234 512 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms