Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gm15197-201ENSMUST00000120526 478 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gm17221-201ENSMUST00000163909 481 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gm17073-201ENSMUST00000168069 556 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Mir8093-201ENSMUST00000185043 137 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gm34379-201ENSMUST00000195036 290 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gm45085-201ENSMUST00000209100 441 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 CT009764.1-201ENSMUST00000222260 483 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gm9791-201ENSMUST00000060997 447 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm14497-201ENSMUST00000119537 580 ntBASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm14234-201ENSMUST00000119539 845 ntBASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm16219-201ENSMUST00000120096 274 ntBASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm12906-201ENSMUST00000154610 441 ntBASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Mir7051-201ENSMUST00000184167 73 ntBASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm37284-201ENSMUST00000193607 539 ntBASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm37782-201ENSMUST00000194879 678 ntBASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm42511-201ENSMUST00000196160 234 ntBASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms