Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm11222-201ENSMUST00000119005 738 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm8602-201ENSMUST00000184045 607 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm7940-201ENSMUST00000218195 769 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Gm38002-201ENSMUST00000193255 180 ntBASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Thumpd1Q99J36 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms