Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Gm9211-201ENSMUST00000182882 975 ntBASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Gm44100-201ENSMUST00000204329 436 ntBASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Gm14193-201ENSMUST00000105067 153 ntBASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Gm11500-201ENSMUST00000118237 601 ntBASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Gm10807-201ENSMUST00000177134 795 ntBASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Gm12407-201ENSMUST00000180219 324 ntBASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Gm44506-201ENSMUST00000206278 965 ntBASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha3Q91Y16 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 128.4 ms