Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gm13422-201ENSMUST00000118834 504 ntBASIC12.32□□□□□ -0.44
TraipQ8VIG6 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gm3329-201ENSMUST00000159873 556 ntBASIC12.32□□□□□ -0.44
TraipQ8VIG6 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gm6407-201ENSMUST00000176468 549 ntBASIC12.32□□□□□ -0.44
TraipQ8VIG6 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gm8492-201ENSMUST00000182375 987 ntBASIC12.32□□□□□ -0.44
TraipQ8VIG6 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gm29155-201ENSMUST00000185910 269 ntBASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gm29067-201ENSMUST00000190821 470 ntBASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.32□□□□□ -0.44
TraipQ8VIG6 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gm13937-201ENSMUST00000121000 988 ntBASIC12.31□□□□□ -0.44
TraipQ8VIG6 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gm15744-201ENSMUST00000161734 213 ntBASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.31□□□□□ -0.44
TraipQ8VIG6 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gm38188-201ENSMUST00000192879 856 ntBASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gm43163-201ENSMUST00000196571 442 ntBASIC12.31□□□□□ -0.44
TraipQ8VIG6 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.31□□□□□ -0.44
TraipQ8VIG6 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.31□□□□□ -0.44
TraipQ8VIG6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms