Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Gm44008-201ENSMUST00000204345 412 ntBASIC9.3□□□□□ -0.92
Nup35Q8R4R6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.3□□□□□ -0.92
Nup35Q8R4R6 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Gm8602-201ENSMUST00000184045 607 ntBASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Gm3096-201ENSMUST00000185770 364 ntBASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Gm38117-201ENSMUST00000194653 939 ntBASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Gm43962-201ENSMUST00000203898 190 ntBASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Gm45598-202ENSMUST00000210719 986 ntBASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup35Q8R4R6 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms