Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm15566-201ENSMUST00000121130 590 ntBASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm19353-201ENSMUST00000184561 445 ntBASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm10774-201ENSMUST00000188689 204 ntBASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm43378-201ENSMUST00000199336 582 ntBASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfwd3Q8CIK8 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Gm14193-201ENSMUST00000105067 153 ntBASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.78□□□□□ -0.68
Rfwd3Q8CIK8 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.77□□□□□ -0.68
Rfwd3Q8CIK8 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rfwd3Q8CIK8 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rfwd3Q8CIK8 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.77□□□□□ -0.68
Rfwd3Q8CIK8 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rfwd3Q8CIK8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.68
Rfwd3Q8CIK8 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Gm11500-201ENSMUST00000118237 601 ntBASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Gm23699-201ENSMUST00000158835 135 ntBASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Gm8459-201ENSMUST00000162504 760 ntBASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Mir6979-201ENSMUST00000183927 56 ntBASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rfwd3Q8CIK8 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms