Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brf1Q8CFK2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brf1Q8CFK2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Gm15617-201ENSMUST00000118973 771 ntBASIC13.77□□□□□ -0.21
Brf1Q8CFK2 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Gm9353-201ENSMUST00000200472 604 ntBASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Gm17831-201ENSMUST00000205579 900 ntBASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.77□□□□□ -0.21
Brf1Q8CFK2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm4294-201ENSMUST00000105169 614 ntBASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm8111-201ENSMUST00000117659 987 ntBASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm23045-201ENSMUST00000175041 96 ntBASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf1Q8CFK2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.75□□□□□ -0.21
Brf1Q8CFK2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Brf1Q8CFK2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf1Q8CFK2 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.75□□□□□ -0.21
Brf1Q8CFK2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms