Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm23270-201ENSMUST00000104055 131 ntBASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm15370-201ENSMUST00000117158 253 ntBASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm12241-201ENSMUST00000118330 726 ntBASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm37597-201ENSMUST00000191853 382 ntBASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm18054-201ENSMUST00000207539 555 ntBASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm18935-201ENSMUST00000212692 664 ntBASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Lysmd4Q8CC84 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm7150-201ENSMUST00000122032 981 ntBASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gzmn-202ENSMUST00000225535 989 ntBASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm25857-201ENSMUST00000082788 129 ntBASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms