Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SynpoQ8CC35 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
SynpoQ8CC35 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Rgr-203ENSMUST00000225070 4704 ntBASIC11.11□□□□□ -0.63
SynpoQ8CC35 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Gm14665-201ENSMUST00000122294 557 ntBASIC11.11□□□□□ -0.63
SynpoQ8CC35 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.11□□□□□ -0.63
SynpoQ8CC35 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Gm17931-201ENSMUST00000208132 634 ntBASIC11.11□□□□□ -0.63
SynpoQ8CC35 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.11□□□□□ -0.63
SynpoQ8CC35 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.11□□□□□ -0.63
SynpoQ8CC35 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.11□□□□□ -0.63
SynpoQ8CC35 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.11□□□□□ -0.63
SynpoQ8CC35 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.11□□□□□ -0.63
SynpoQ8CC35 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.1□□□□□ -0.63
SynpoQ8CC35 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.1□□□□□ -0.63
SynpoQ8CC35 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Gm5419-201ENSMUST00000119301 527 ntBASIC11.1□□□□□ -0.63
SynpoQ8CC35 Gm15610-201ENSMUST00000120584 195 ntBASIC11.1□□□□□ -0.63
SynpoQ8CC35 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.1□□□□□ -0.63
SynpoQ8CC35 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Mir7686-201ENSMUST00000200604 57 ntBASIC11.1□□□□□ -0.63
SynpoQ8CC35 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.1□□□□□ -0.63
SynpoQ8CC35 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.1□□□□□ -0.63
SynpoQ8CC35 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SynpoQ8CC35 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms