Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Gm7741-201ENSMUST00000181445 989 ntBASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Mir7686-201ENSMUST00000200604 57 ntBASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trim9Q8C7M3 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim9Q8C7M3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gm12419-201ENSMUST00000116649 636 ntBASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gm22144-201ENSMUST00000157402 102 ntBASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Mir5120-201ENSMUST00000175020 78 ntBASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.58□□□□□ -0.4
Trim9Q8C7M3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gm42867-201ENSMUST00000202995 469 ntBASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.58□□□□□ -0.4
Trim9Q8C7M3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim9Q8C7M3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Gm11836-201ENSMUST00000121022 441 ntBASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Gm9089-201ENSMUST00000122027 526 ntBASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Gm22846-201ENSMUST00000157706 270 ntBASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms