Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.34□□□□□ -0.27
Usp44Q8C2S0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm3551-201ENSMUST00000190750 664 ntBASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm37826-201ENSMUST00000195329 322 ntBASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm30946-201ENSMUST00000198288 724 ntBASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm45118-201ENSMUST00000208928 825 ntBASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Nsd1-205ENSMUST00000224693 852 ntBASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Usp44Q8C2S0 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Usp44Q8C2S0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Usp44Q8C2S0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Usp44Q8C2S0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Gm8302-201ENSMUST00000119217 852 ntBASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Gm17391-201ENSMUST00000171036 126 ntBASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Gm44980-201ENSMUST00000205826 314 ntBASIC13.33□□□□□ -0.28
Usp44Q8C2S0 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms