Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gm13342-201ENSMUST00000121055 207 ntBASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gm26956-201ENSMUST00000182176 986 ntBASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gm27023-201ENSMUST00000182372 285 ntBASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gm2546-201ENSMUST00000182630 991 ntBASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gm43822-201ENSMUST00000200285 476 ntBASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Tsen54Q8C2A2 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm14723-201ENSMUST00000118686 215 ntBASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm23119-201ENSMUST00000158610 140 ntBASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm2991-201ENSMUST00000173338 480 ntBASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Mir8109-201ENSMUST00000184375 117 ntBASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm6621-201ENSMUST00000193251 772 ntBASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm10254-201ENSMUST00000052888 867 ntBASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tsen54Q8C2A2 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.59□□□□□ -0.88
Tsen54Q8C2A2 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tsen54Q8C2A2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms