Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm24844-201ENSMUST00000158679 127 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Mir5132-201ENSMUST00000175166 71 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 Mir6979-201ENSMUST00000183927 56 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Lect2-202ENSMUST00000225183 823 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.78□□□□□ -0.68
Ska3Q8C263 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ska3Q8C263 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.78□□□□□ -0.68
Ska3Q8C263 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm22711-201ENSMUST00000116890 133 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm11331-201ENSMUST00000119764 288 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm7150-201ENSMUST00000122032 981 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ska3Q8C263 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm23699-201ENSMUST00000158835 135 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.78□□□□□ -0.68
Ska3Q8C263 Mir7686-201ENSMUST00000200604 57 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm9555-201ENSMUST00000200908 583 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Gm43966-201ENSMUST00000203301 612 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.78□□□□□ -0.68
Ska3Q8C263 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ska3Q8C263 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ska3Q8C263 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Ska3Q8C263 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ska3Q8C263 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ska3Q8C263 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ska3Q8C263 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms