Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Gm15806-201ENSMUST00000120696 955 ntBASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Gm12138-201ENSMUST00000122180 951 ntBASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Gm43818-201ENSMUST00000200605 466 ntBASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.4□□□□□ -0.9
Smco3Q8BQM7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smco3Q8BQM7 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smco3Q8BQM7 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Gm6222-202ENSMUST00000182143 629 ntBASIC9.39□□□□□ -0.91
Smco3Q8BQM7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smco3Q8BQM7 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms