Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Gm29808-201ENSMUST00000194419 468 ntBASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 AC117769.1-201ENSMUST00000224716 1120 ntBASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 AC134793.1-202ENSMUST00000227444 803 ntBASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col16a1Q8BLX7 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Gm17836-201ENSMUST00000191976 1302 ntBASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Gm5526-201ENSMUST00000153604 423 ntBASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Gm7183-201ENSMUST00000213870 1005 ntBASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Col16a1Q8BLX7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Gm5764-201ENSMUST00000118817 885 ntBASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Gm27826-201ENSMUST00000175282 255 ntBASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Gm8226-201ENSMUST00000190511 798 ntBASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Gm6794-201ENSMUST00000203829 457 ntBASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 AC154477.1-201ENSMUST00000226515 773 ntBASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 AC137842.2-201ENSMUST00000227734 797 ntBASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Paupar-201ENSMUST00000194826 3482 ntBASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms