Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm6390-201ENSMUST00000215034 589 ntBASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.23□□□□□ -0.45
Smarcal1Q8BJL0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Gm16030-201ENSMUST00000159098 603 ntBASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Gm20392-201ENSMUST00000173047 701 ntBASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Gm44008-201ENSMUST00000204345 412 ntBASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Gm44647-201ENSMUST00000207402 428 ntBASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcal1Q8BJL0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Cog3-203ENSMUST00000227473 4197 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm13047-201ENSMUST00000117116 815 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm15197-201ENSMUST00000120526 478 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm24992-201ENSMUST00000157412 130 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm22846-201ENSMUST00000157706 270 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm24809-201ENSMUST00000175318 271 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm26989-201ENSMUST00000182608 749 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcal1Q8BJL0 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.21□□□□□ -0.46
Smarcal1Q8BJL0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.21□□□□□ -0.46
Smarcal1Q8BJL0 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.21□□□□□ -0.46
Smarcal1Q8BJL0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.21□□□□□ -0.46
Smarcal1Q8BJL0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 124.7 ms