Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm2553-201ENSMUST00000215986 605 ntBASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim6Q8BGE7 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.15□□□□□ -0.47
Trim6Q8BGE7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trim6Q8BGE7 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim6Q8BGE7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm11930-201ENSMUST00000117788 190 ntBASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm27046-201ENSMUST00000182160 463 ntBASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm27572-201ENSMUST00000183702 255 ntBASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm18935-201ENSMUST00000212692 664 ntBASIC12.14□□□□□ -0.47
Trim6Q8BGE7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gzmn-202ENSMUST00000225535 989 ntBASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim6Q8BGE7 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Gm43433-201ENSMUST00000196573 481 ntBASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Gm18054-201ENSMUST00000207539 555 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms