Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm14071-201ENSMUST00000117817 509 ntBASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm24398-201ENSMUST00000157870 109 ntBASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 AC114573.1-201ENSMUST00000224120 1210 ntBASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh19Q80TF3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh19Q80TF3 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh19Q80TF3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.27□□□□□ -0.6
Pcdh19Q80TF3 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.27□□□□□ -0.6
Pcdh19Q80TF3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Pcdh19Q80TF3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh19Q80TF3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh19Q80TF3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Pcdh19Q80TF3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh19Q80TF3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm16166-201ENSMUST00000118291 787 ntBASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm28324-201ENSMUST00000187913 264 ntBASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm37284-201ENSMUST00000193607 539 ntBASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm37458-201ENSMUST00000194055 410 ntBASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm34023-201ENSMUST00000195539 217 ntBASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms