Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Gm16166-201ENSMUST00000118291 787 ntBASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Gm23153-201ENSMUST00000175323 313 ntBASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Mir8093-201ENSMUST00000185043 137 ntBASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Gm8342-201ENSMUST00000209839 757 ntBASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Olfr584-201ENSMUST00000098210 964 ntBASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh8Q7TSK3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm12419-201ENSMUST00000116649 636 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm15615-201ENSMUST00000118876 198 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm11244-201ENSMUST00000121243 237 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm24398-201ENSMUST00000157870 109 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm4978-201ENSMUST00000071565 801 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gm5451-201ENSMUST00000080545 579 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Rgr-203ENSMUST00000225070 4704 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh8Q7TSK3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms