Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Gm5451-201ENSMUST00000080545 579 ntBASIC12.21□□□□□ -0.45
Rnf139Q7TMV1 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.21□□□□□ -0.45
Rnf139Q7TMV1 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf139Q7TMV1 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf139Q7TMV1 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf139Q7TMV1 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf139Q7TMV1 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf139Q7TMV1 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.21□□□□□ -0.46
Rnf139Q7TMV1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Gm25492-201ENSMUST00000157383 129 ntBASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Gm23694-201ENSMUST00000179335 110 ntBASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Gm9132-201ENSMUST00000210182 832 ntBASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf139Q7TMV1 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Gm25076-201ENSMUST00000104098 132 ntBASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Gm21778-201ENSMUST00000178779 471 ntBASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Gm10731-201ENSMUST00000181171 448 ntBASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Gm43916-201ENSMUST00000205062 967 ntBASIC12.19□□□□□ -0.46
Rnf139Q7TMV1 Gm8959-201ENSMUST00000213150 571 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms