Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Gm19587-201ENSMUST00000191395 545 ntBASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Gm34379-201ENSMUST00000195036 290 ntBASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc88cQ6VGS5 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Gm8302-201ENSMUST00000119217 852 ntBASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Gm16219-201ENSMUST00000120096 274 ntBASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc88cQ6VGS5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Gm14807-201ENSMUST00000116640 983 ntBASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Gm26134-201ENSMUST00000178484 110 ntBASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Mir6407-201ENSMUST00000184510 101 ntBASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc88cQ6VGS5 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms