Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Gm13829-201ENSMUST00000119600 138 ntBASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Gm14726-201ENSMUST00000120623 896 ntBASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Gm27046-201ENSMUST00000182160 463 ntBASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Rprl1-202ENSMUST00000198476 238 ntBASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Gm18054-201ENSMUST00000207539 555 ntBASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scaf4Q6PFF0 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Gm37424-201ENSMUST00000191727 561 ntBASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Gm43930-201ENSMUST00000203868 845 ntBASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms