Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
SspnQ62147 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.62□□□□□ -0.87
SspnQ62147 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC9.62□□□□□ -0.87
SspnQ62147 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SspnQ62147 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SspnQ62147 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
SspnQ62147 Gm13350-201ENSMUST00000120519 479 ntBASIC9.62□□□□□ -0.87
SspnQ62147 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.62□□□□□ -0.87
SspnQ62147 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SspnQ62147 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SspnQ62147 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.62□□□□□ -0.87
SspnQ62147 Gm43184-201ENSMUST00000197247 542 ntBASIC9.62□□□□□ -0.87
SspnQ62147 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.62□□□□□ -0.87
SspnQ62147 Gm4157-201ENSMUST00000211647 679 ntBASIC9.62□□□□□ -0.87
SspnQ62147 Gm6082-201ENSMUST00000215204 454 ntBASIC9.62□□□□□ -0.87
SspnQ62147 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
SspnQ62147 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.62□□□□□ -0.87
SspnQ62147 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SspnQ62147 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SspnQ62147 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SspnQ62147 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
SspnQ62147 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.61□□□□□ -0.87
SspnQ62147 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SspnQ62147 Gm25668-201ENSMUST00000157700 129 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.61□□□□□ -0.87
SspnQ62147 Gm7584-201ENSMUST00000175829 940 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Gm25890-201ENSMUST00000177643 165 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Gm22614-201ENSMUST00000178300 165 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Gm28686-201ENSMUST00000187404 609 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.61□□□□□ -0.87
SspnQ62147 Gm44262-201ENSMUST00000204969 372 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Gm22042-201ENSMUST00000082989 165 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Gm26110-201ENSMUST00000083971 165 ntBASIC9.61□□□□□ -0.87
SspnQ62147 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SspnQ62147 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SspnQ62147 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SspnQ62147 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms