Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm15329-201ENSMUST00000121408 155 ntBASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm25830-201ENSMUST00000158923 132 ntBASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm16030-201ENSMUST00000159098 603 ntBASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm5340-201ENSMUST00000203733 880 ntBASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx49Q4FZF3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Gm14441-201ENSMUST00000121960 540 ntBASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Gm24809-201ENSMUST00000175318 271 ntBASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Gm6114-201ENSMUST00000182472 968 ntBASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Gm43752-201ENSMUST00000198475 697 ntBASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Trav11n-201ENSMUST00000200113 343 ntBASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx49Q4FZF3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Gm22594-201ENSMUST00000104251 130 ntBASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Gm4294-201ENSMUST00000105169 614 ntBASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Gm25677-201ENSMUST00000174983 72 ntBASIC13.35□□□□□ -0.27
Ddx49Q4FZF3 Gm42430-201ENSMUST00000197209 616 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms