Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Gm20508-201ENSMUST00000172480 487 ntTSL 2 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Mark4-ps-201ENSMUST00000196140 384 ntBASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Gm42591-201ENSMUST00000197249 700 ntBASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Gm44721-201ENSMUST00000206978 472 ntBASIC5.82□□□□□ -1.48
Ush2AQ2QI47 AC155929.2-201ENSMUST00000218541 307 ntBASIC5.82□□□□□ -1.48
Ush2AQ2QI47 AC139130.1-201ENSMUST00000228281 620 ntBASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Gm13169-201ENSMUST00000122090 1459 ntBASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Gm38309-201ENSMUST00000192063 1518 ntBASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Gm38038-201ENSMUST00000193803 259 ntBASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Aqp8-202ENSMUST00000098056 1451 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ush2AQ2QI47 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Hbq1b-201ENSMUST00000101387 562 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Ly6g6e-202ENSMUST00000172494 464 ntTSL 3 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm28588-201ENSMUST00000191581 796 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm38337-201ENSMUST00000193986 599 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gzmb-201ENSMUST00000015581 1436 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 AC154220.1-201ENSMUST00000225033 1705 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm8644-201ENSMUST00000118619 596 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Olfr1332-ps1-201ENSMUST00000119243 960 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm15368-201ENSMUST00000120438 858 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Rad52-212ENSMUST00000162461 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Mypopos-202ENSMUST00000205975 2321 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm7847-201ENSMUST00000151645 777 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms